HL_3J7Z_052

3D structure

PDB id

3J7Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the E. coli 50S subunit with ErmCL nascent chain

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

GUAAUCC

Length

7 nucleotides

Bulged bases

3J7Z|1|A|A|2211, 3J7Z|1|A|U|2213

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_3J7Z_052 not in the Motif Atlas

Homologous match to HL_5J7L_185

Geometric discrepancy: 0.1242

The information below is about HL_5J7L_185

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_49922.4

Basepair signature

cWW-F-F-F

Number of instances in this motif group

10

Unit IDs

3J7Z|1|A|G|2209
3J7Z|1|A|U|2210
3J7Z|1|A|A|2211
3J7Z|1|A|A|2212
3J7Z|1|A|U|2213
3J7Z|1|A|C|2214
3J7Z|1|A|C|2215

Current chains

Chain A

23S rRNA

Nearby chains

Chain C

50S ribosomal protein L2

Chain X

50S ribosomal protein L28