HL_3J7Z_066

3D structure

PDB id

3J7Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the E. coli 50S subunit with ErmCL nascent chain

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

CUGAAAGCAUCUAAG

Length

15 nucleotides

Bulged bases

3J7Z|1|A|G|2751, 3J7Z|1|A|C|2755

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_3J7Z_066 not in the Motif Atlas

Homologous match to HL_5J7L_199

Geometric discrepancy: 0.0822

The information below is about HL_5J7L_199

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_74055.2

Basepair signature

cWW-tWH-cWH-tSH-tHW-tHW-tSW

Number of instances in this motif group

7

Unit IDs

3J7Z|1|A|C|2745
3J7Z|1|A|U|2746
3J7Z|1|A|G|2747
3J7Z|1|A|A|2748
3J7Z|1|A|A|2749
3J7Z|1|A|A|2750
3J7Z|1|A|G|2751
3J7Z|1|A|C|2752
3J7Z|1|A|A|2753
3J7Z|1|A|U|2754
3J7Z|1|A|C|2755
3J7Z|1|A|U|2756
3J7Z|1|A|A|2757
3J7Z|1|A|A|2758
3J7Z|1|A|G|2759

Current chains

Chain A

23S rRNA

Nearby chains

Chain 4

50S ribosomal protein L36

Chain G

50S ribosomal protein L6

Chain J

50S ribosomal protein L13