HL_3J8G_015

3D structure

PDB id

3J8G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Electron cryo-microscopy structure of EngA bound with the 50S ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

5 Å

Loop

Sequence

GGACCAUC

Length

8 nucleotides

Bulged bases

3J8G|1|B|G|411

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_3J8G_015 not in the Motif Atlas

Homologous match to HL_7RQB_014

Geometric discrepancy: 0.1881

The information below is about HL_7RQB_014

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_96598.1

Basepair signature

cWW

Number of instances in this motif group

15

Unit IDs

3J8G|1|B|G|410
3J8G|1|B|G|411
3J8G|1|B|A|412
3J8G|1|B|C|413
3J8G|1|B|C|414
3J8G|1|B|A|415
3J8G|1|B|U|416
3J8G|1|B|C|417

Current chains

Chain B

23S rRNA

Nearby chains

Chain 5

50S ribosomal protein L1