HL_3J8G_029

3D structure

PDB id

3J8G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Electron cryo-microscopy structure of EngA bound with the 50S ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

5 Å

Loop

Sequence

GAAACAAC

Length

8 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_3J8G_029 not in the Motif Atlas

Homologous match to HL_7RQB_028

Geometric discrepancy: 0.3428

The information below is about HL_7RQB_028

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_64430.2

Basepair signature

cWW-F-F-F

Number of instances in this motif group

13

Unit IDs

3J8G|1|B|G|978
3J8G|1|B|A|979
3J8G|1|B|A|980
3J8G|1|B|A|981
3J8G|1|B|C|982
3J8G|1|B|A|983
3J8G|1|B|A|984
3J8G|1|B|C|985

Current chains

Chain B

23S rRNA

Nearby chains

Chain 2

50S ribosomal protein L30

Chain Q

50S ribosomal protein L20

Chain R

50S ribosomal protein L21