HL_3J8G_057

3D structure

PDB id

3J8G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Electron cryo-microscopy structure of EngA bound with the 50S ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

5 Å

Loop

Sequence

GGUCGGACAUC

Length

11 nucleotides

Bulged bases

3J8G|1|B|A|2309

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_3J8G_057 not in the Motif Atlas

Homologous match to HL_7RQB_055

Geometric discrepancy: 0.5227

The information below is about HL_7RQB_055

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_11805.3

Basepair signature

cWW-F-F-F-F-F-F-F-F-F

Number of instances in this motif group

3

Unit IDs

3J8G|1|B|G|2303
3J8G|1|B|G|2304
3J8G|1|B|U|2305
3J8G|1|B|C|2306
3J8G|1|B|G|2307
3J8G|1|B|G|2308
3J8G|1|B|A|2309
3J8G|1|B|C|2310
3J8G|1|B|A|2311
3J8G|1|B|U|2312
3J8G|1|B|C|2313

Current chains

Chain B

23S rRNA

Nearby chains

Chain F

50S ribosomal protein L5