HL_3J8G_058

3D structure

PDB id

3J8G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Electron cryo-microscopy structure of EngA bound with the 50S ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

5 Å

Loop

Sequence

GUGCAAUGGC

Length

10 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_3J8G_058 not in the Motif Atlas

Geometric match to HL_2ZZM_002

Geometric discrepancy: 0.3298

The information below is about HL_2ZZM_002

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_33487.1

Basepair signature

cWW-cWW

Number of instances in this motif group

2

Unit IDs

3J8G|1|B|G|2323
3J8G|1|B|U|2324
3J8G|1|B|G|2325
3J8G|1|B|C|2326
3J8G|1|B|A|2327
3J8G|1|B|A|2328
3J8G|1|B|U|2329
3J8G|1|B|G|2330
3J8G|1|B|G|2331
3J8G|1|B|C|2332

Current chains

Chain B

23S rRNA

Nearby chains

Chain F

50S ribosomal protein L5

Chain M

50S ribosomal protein L16

Chain Y

50S ribosomal protein L27