HL_3J9M_023

3D structure

PDB id

3J9M (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the human mitochondrial ribosome (class 1)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

AGCAUCACCAGUAUU

Length

15 nucleotides

Bulged bases

3J9M|1|A|C|2523, 3J9M|1|A|A|2527, 3J9M|1|A|U|2531

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3J9M|1|A|A|2518
3J9M|1|A|G|2519
3J9M|1|A|C|2520
3J9M|1|A|A|2521
3J9M|1|A|U|2522
3J9M|1|A|C|2523
3J9M|1|A|A|2524
3J9M|1|A|C|2525
3J9M|1|A|C|2526
3J9M|1|A|A|2527
3J9M|1|A|G|2528
3J9M|1|A|U|2529
3J9M|1|A|A|2530
3J9M|1|A|U|2531
3J9M|1|A|U|2532

Current chains

Chain A

16S rRNA

Nearby chains

Chain 5

mL37

Chain AA

Small subunit ribosomal RNA; SSU rRNA

Chain D

uL2m