HL_3J9M_027
3D structure
- PDB id
- 3J9M (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the human mitochondrial ribosome (class 1)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- GUGAAGAGGC
- Length
- 10 nucleotides
- Bulged bases
- 3J9M|1|A|A|2693, 3J9M|1|A|A|2694, 3J9M|1|A|G|2695
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_3J9M_027 not in the Motif Atlas
- Homologous match to HL_4WF9_047
- Geometric discrepancy: 0.1445
- The information below is about HL_4WF9_047
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_78372.1
- Basepair signature
- cWW-tWH-F-F-F
- Number of instances in this motif group
- 10
Unit IDs
3J9M|1|A|G|2690
3J9M|1|A|U|2691
3J9M|1|A|G|2692
3J9M|1|A|A|2693
3J9M|1|A|A|2694
3J9M|1|A|G|2695
3J9M|1|A|A|2696
3J9M|1|A|G|2697
3J9M|1|A|G|2698
3J9M|1|A|C|2699
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain 0
- bL32m
- Chain E
- uL3m
- Chain S
- bL21m
- Chain o
- mL63
- Chain r
- mL66 (bS18a)
Coloring options: