HL_3J9M_032
3D structure
- PDB id
- 3J9M (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the human mitochondrial ribosome (class 1)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- AUAACU
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_3J9M_032 not in the Motif Atlas
- Geometric match to HL_5B2P_001
- Geometric discrepancy: 0.1415
- The information below is about HL_5B2P_001
- Detailed Annotation
- GNRA
- Broad Annotation
- No text annotation
- Motif group
- HL_34789.4
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 399
Unit IDs
3J9M|1|A|A|2902
3J9M|1|A|U|2903
3J9M|1|A|A|2904
3J9M|1|A|A|2905
3J9M|1|A|C|2906
3J9M|1|A|U|2907
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain 1
- bL33m
- Chain 3
- bL35m
- Chain q
- mL64 (CRIF1)
- Chain u
- E-site tRNA
Coloring options: