HL_3J9M_038

3D structure

PDB id

3J9M (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the human mitochondrial ribosome (class 1)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

UCACAA

Length

6 nucleotides

Bulged bases

3J9M|1|A|C|3157

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_3J9M_038 not in the Motif Atlas

Geometric match to HL_4V9F_005

Geometric discrepancy: 0.3705

The information below is about HL_4V9F_005

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_13184.1

Basepair signature

cWW-F-F-F

Number of instances in this motif group

9

Unit IDs

3J9M|1|A|U|3154
3J9M|1|A|C|3155
3J9M|1|A|A|3156
3J9M|1|A|C|3157
3J9M|1|A|A|3158
3J9M|1|A|A|3159

Current chains

Chain A

16S rRNA

Nearby chains

Chain E

uL3m

Chain O

bL17m

Chain Q

bL19m