HL_3J9M_040
3D structure
- PDB id
- 3J9M (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the human mitochondrial ribosome (class 1)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- CAAGAACAG
- Length
- 9 nucleotides
- Bulged bases
- 3J9M|1|A|A|3217
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_3J9M_040 not in the Motif Atlas
- Geometric match to HL_7RQB_068
- Geometric discrepancy: 0.0928
- The information below is about HL_7RQB_068
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_64690.1
- Basepair signature
- cWW-cSW-F-F-F-F
- Number of instances in this motif group
- 9
Unit IDs
3J9M|1|A|C|3216
3J9M|1|A|A|3217
3J9M|1|A|A|3218
3J9M|1|A|G|3219
3J9M|1|A|A|3220
3J9M|1|A|A|3221
3J9M|1|A|C|3222
3J9M|1|A|A|3223
3J9M|1|A|G|3224
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain 0
- bL32m
- Chain E
- uL3m
- Chain O
- bL17m
- Chain Q
- bL19m
Coloring options: