HL_3J9M_046

3D structure

PDB id

3J9M (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the human mitochondrial ribosome (class 1)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

CGAAAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_30528.1

Basepair signature

cWW-tSH-R-R

Number of instances in this motif group

400

Unit IDs

3J9M|1|AA|C|842
3J9M|1|AA|G|843
3J9M|1|AA|A|844
3J9M|1|AA|A|845
3J9M|1|AA|A|846
3J9M|1|AA|G|847

Current chains

Chain AA

12S rRNA

Nearby chains

Chain A0

mS34

Chain AM

bS16m

Chain AO

mS40 (bS18b)

Chain AU

mS26