HL_3J9W_035
3D structure
- PDB id
- 3J9W (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the Bacillus subtilis MifM-stalled ribosome complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- GUUCGAGUC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_73671.1
- Basepair signature
- cWW-R-R-tWH-R-R-R
- Number of instances in this motif group
- 117
Unit IDs
3J9W|1|AX|G|53
3J9W|1|AX|U|54
3J9W|1|AX|U|55
3J9W|1|AX|C|56
3J9W|1|AX|G|57
3J9W|1|AX|A|58
3J9W|1|AX|G|59
3J9W|1|AX|U|60
3J9W|1|AX|C|61
Current chains
- Chain AX
- tRNA-Asp
Nearby chains
- Chain BA
- Large subunit ribosomal RNA; LSU rRNA
- Chain BG
- 50S ribosomal protein uL5
- Chain BP
- 50S ribosomal protein uL16
Coloring options: