HL_3J9W_064

3D structure

PDB id

3J9W (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the Bacillus subtilis MifM-stalled ribosome complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

CUUAGAAGCAG

Length

11 nucleotides

Bulged bases

3J9W|1|BA|A|1116

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_03511.1

Basepair signature

cWW-R-R-R-tWH-R-R

Number of instances in this motif group

1

Unit IDs

3J9W|1|BA|C|1110
3J9W|1|BA|U|1111
3J9W|1|BA|U|1112
3J9W|1|BA|A|1113
3J9W|1|BA|G|1114
3J9W|1|BA|A|1115
3J9W|1|BA|A|1116
3J9W|1|BA|G|1117
3J9W|1|BA|C|1118
3J9W|1|BA|A|1119
3J9W|1|BA|G|1120

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain BK

50S ribosomal protein uL11