HL_3J9Z_004

3D structure

PDB id

3J9Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

Activation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor G

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

UUUCGA

Length

6 nucleotides

Bulged bases

3J9Z|1|LA|U|139

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_3J9Z_004 not in the Motif Atlas

Geometric match to HL_6CK5_001

Geometric discrepancy: 0.2362

The information below is about HL_6CK5_001

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_34617.5

Basepair signature

cWW-tSW-F

Number of instances in this motif group

57

Unit IDs

3J9Z|1|LA|U|137
3J9Z|1|LA|U|138
3J9Z|1|LA|U|139
3J9Z|1|LA|C|140
3J9Z|1|LA|G|141
3J9Z|1|LA|A|142

Current chains

Chain LA

23S ribosomal RNA

Nearby chains

Chain LR

50S ribosomal protein L23