HL_3J9Z_030

3D structure

PDB id

3J9Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

Activation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor G

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CUUAUG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_3J9Z_030 not in the Motif Atlas

Geometric match to HL_2Y8Y_001

Geometric discrepancy: 0.2933

The information below is about HL_2Y8Y_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_81100.2

Basepair signature

cWW

Number of instances in this motif group

3

Unit IDs

3J9Z|1|LA|C|1172
3J9Z|1|LA|U|1173
3J9Z|1|LA|U|1174
3J9Z|1|LA|A|1175
3J9Z|1|LA|U|1176
3J9Z|1|LA|G|1177

Current chains

Chain LA

23S ribosomal RNA

Nearby chains

Chain LH

50S ribosomal protein L15