HL_3J9Z_042

3D structure

PDB id

3J9Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

Activation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor G

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CUUCGG

Length

6 nucleotides

Bulged bases

3J9Z|1|LA|U|1693

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_3J9Z_042 not in the Motif Atlas

Homologous match to HL_5J7L_175

Geometric discrepancy: 0.1447

The information below is about HL_5J7L_175

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_34617.5

Basepair signature

cWW-tSW-F

Number of instances in this motif group

57

Unit IDs

3J9Z|1|LA|C|1691
3J9Z|1|LA|U|1692
3J9Z|1|LA|U|1693
3J9Z|1|LA|C|1694
3J9Z|1|LA|G|1695
3J9Z|1|LA|G|1696

Current chains

Chain LA

23S ribosomal RNA

Nearby chains

Chain LN

50S ribosomal protein L2

Chain SA

Small subunit ribosomal RNA; SSU rRNA