HL_3J9Z_053

3D structure

PDB id

3J9Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

Activation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor G

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CUGGGGCGG

Length

9 nucleotides

Bulged bases

3J9Z|1|LA|G|2250

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_3J9Z_053 not in the Motif Atlas

Homologous match to HL_7RQB_053

Geometric discrepancy: 0.1184

The information below is about HL_7RQB_053

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3J9Z|1|LA|C|2248
3J9Z|1|LA|U|2249
3J9Z|1|LA|G|2250
3J9Z|1|LA|G|2251
3J9Z|1|LA|G|2252
3J9Z|1|LA|G|2253
3J9Z|1|LA|C|2254
3J9Z|1|LA|G|2255
3J9Z|1|LA|G|2256

Current chains

Chain LA

23S ribosomal RNA

Nearby chains

Chain LI

50S ribosomal protein L16

Chain LU

50S ribosomal protein L27

Chain S6

Transfer RNA; tRNA