HL_3J9Z_060
3D structure
- PDB id
- 3J9Z (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Activation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor G
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- AGUUCAUAU
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_3J9Z_060 not in the Motif Atlas
- Homologous match to HL_5J7L_193
- Geometric discrepancy: 0.2344
- The information below is about HL_5J7L_193
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_32735.2
- Basepair signature
- cWW-tSH-F-F-F-F-F
- Number of instances in this motif group
- 7
Unit IDs
3J9Z|1|LA|A|2471
3J9Z|1|LA|G|2472
3J9Z|1|LA|U|2473
3J9Z|1|LA|U|2474
3J9Z|1|LA|C|2475
3J9Z|1|LA|A|2476
3J9Z|1|LA|U|2477
3J9Z|1|LA|A|2478
3J9Z|1|LA|U|2479
Current chains
- Chain LA
- 23S ribosomal RNA
Nearby chains
- Chain L5
- 50S ribosomal protein L36
- Chain L8
- 50S ribosomal protein L6
- Chain LI
- 50S ribosomal protein L16
- Chain S1
- Elongation factor G
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