HL_3J9Z_065

3D structure

PDB id

3J9Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

Activation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor G

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

UGCCAA

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_3J9Z_065 not in the Motif Atlas

Homologous match to HL_7A0S_064

Geometric discrepancy: 0.1397

The information below is about HL_7A0S_064

Detailed Annotation

Ribsomal LSU H95

Broad Annotation

Ribsomal LSU H95

Motif group

HL_65794.5

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

14

Unit IDs

3J9Z|1|LA|U|2701
3J9Z|1|LA|G|2702
3J9Z|1|LA|C|2703
3J9Z|1|LA|C|2704
3J9Z|1|LA|A|2705
3J9Z|1|LA|A|2706

Current chains

Chain LA

23S ribosomal RNA

Nearby chains

Chain LJ

50S ribosomal protein L17