HL_3J9Z_072
3D structure
- PDB id
- 3J9Z (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Activation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor G
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- CAGCCUGGUAG
- Length
- 11 nucleotides
- Bulged bases
- 3J9Z|1|S6|C|17, 3J9Z|1|S6|G|20, 3J9Z|1|S6|U|21
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_3J9Z_072 not in the Motif Atlas
- Homologous match to HL_4LCK_001
- Geometric discrepancy: 0.1853
- The information below is about HL_4LCK_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
3J9Z|1|S6|C|13
3J9Z|1|S6|A|14
3J9Z|1|S6|G|15
3J9Z|1|S6|C|16
3J9Z|1|S6|C|17
3J9Z|1|S6|U|18
3J9Z|1|S6|G|19
3J9Z|1|S6|G|20
3J9Z|1|S6|U|21
3J9Z|1|S6|A|22
3J9Z|1|S6|G|23
Current chains
- Chain S6
- P-tRNA
Nearby chains
- Chain L7
- 50S ribosomal protein L5
- Chain LA
- Large subunit ribosomal RNA; LSU rRNA
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