HL_3J9Z_073
3D structure
- PDB id
- 3J9Z (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Activation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor G
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- GCUCAUAAC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_3J9Z_073 not in the Motif Atlas
- Homologous match to HL_4TUE_034
- Geometric discrepancy: 0.1575
- The information below is about HL_4TUE_034
- Detailed Annotation
- tRNA anticodon loop
- Broad Annotation
- Anticodon loop
- Motif group
- HL_06059.5
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 50
Unit IDs
3J9Z|1|S6|G|32
3J9Z|1|S6|C|33
3J9Z|1|S6|U|34
3J9Z|1|S6|C|35
3J9Z|1|S6|A|36
3J9Z|1|S6|U|37
3J9Z|1|S6|A|38
3J9Z|1|S6|A|39
3J9Z|1|S6|C|40
Current chains
- Chain S6
- P-tRNA
Nearby chains
- Chain S1
- Elongation factor G
- Chain S7
- Transfer RNA; tRNA
- Chain SA
- Small subunit ribosomal RNA; SSU rRNA
- Chain SI
- 30S ribosomal protein S9
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