HL_3J9Z_085
3D structure
- PDB id
- 3J9Z (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Activation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor G
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- AACUGAGACACGGU
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_3J9Z_085 not in the Motif Atlas
- Homologous match to HL_4LFB_008
- Geometric discrepancy: 0.3119
- The information below is about HL_4LFB_008
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_81205.3
- Basepair signature
- cWW-cWW-tWH-F-tWH-F-F-F-F-F
- Number of instances in this motif group
- 2
Unit IDs
3J9Z|1|SA|A|320
3J9Z|1|SA|A|321
3J9Z|1|SA|C|322
3J9Z|1|SA|U|323
3J9Z|1|SA|G|324
3J9Z|1|SA|A|325
3J9Z|1|SA|G|326
3J9Z|1|SA|A|327
3J9Z|1|SA|C|328
3J9Z|1|SA|A|329
3J9Z|1|SA|C|330
3J9Z|1|SA|G|331
3J9Z|1|SA|G|332
3J9Z|1|SA|U|333
Current chains
- Chain SA
- 16S ribosomal RNA
Nearby chains
- Chain SP
- 30S ribosomal protein S16
- Chain ST
- 30S ribosomal protein S20
Coloring options: