HL_3J9Z_090

3D structure

PDB id

3J9Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

Activation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor G

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CAGCCG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_3J9Z_090 not in the Motif Atlas

Geometric match to HL_4WF9_003

Geometric discrepancy: 0.2011

The information below is about HL_4WF9_003

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.5

Basepair signature

cWW-F

Number of instances in this motif group

19

Unit IDs

3J9Z|1|SA|C|522
3J9Z|1|SA|A|523
3J9Z|1|SA|G|524
3J9Z|1|SA|C|525
3J9Z|1|SA|C|526
3J9Z|1|SA|G|527

Current chains

Chain SA

16S ribosomal RNA

Nearby chains

Chain SL

30S ribosomal protein S12