HL_3JA1_004

3D structure

PDB id

3JA1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Activation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor G

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

UUUCGA

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_3JA1_004 not in the Motif Atlas

Geometric match to HL_5J7L_171

Geometric discrepancy: 0.3185

The information below is about HL_5J7L_171

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_34617.5

Basepair signature

cWW-tSW-F

Number of instances in this motif group

57

Unit IDs

3JA1|1|LA|U|137
3JA1|1|LA|U|138
3JA1|1|LA|U|139
3JA1|1|LA|C|140
3JA1|1|LA|G|141
3JA1|1|LA|A|142

Current chains

Chain LA

23S ribosomal RNA

Nearby chains

Chain L0

50S ribosomal protein L29

Chain LV

50S ribosomal protein L23