HL_3JA1_010

3D structure

PDB id

3JA1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Activation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor G

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GAUAC

Length

5 nucleotides

Bulged bases

3JA1|1|LA|U|321, 3JA1|1|LA|A|322

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_3JA1_010 not in the Motif Atlas

Homologous match to HL_7A0S_011

Geometric discrepancy: 0.1243

The information below is about HL_7A0S_011

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.6

Basepair signature

cWW-F

Number of instances in this motif group

21

Unit IDs

3JA1|1|LA|G|319
3JA1|1|LA|A|320
3JA1|1|LA|U|321
3JA1|1|LA|A|322
3JA1|1|LA|C|323

Current chains

Chain LA

23S ribosomal RNA

Nearby chains

Chain LF

50S ribosomal protein L4

Chain LW

50S ribosomal protein L24