HL_3JA1_028

3D structure

PDB id

3JA1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Activation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor G

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CUUAGAAGCAG

Length

11 nucleotides

Bulged bases

3JA1|1|LA|U|1066

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_3JA1_028 not in the Motif Atlas

Geometric match to HL_2Y9H_003

Geometric discrepancy: 0.2131

The information below is about HL_2Y9H_003

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.7

Basepair signature

cWW-F

Number of instances in this motif group

22

Unit IDs

3JA1|1|LA|C|1064
3JA1|1|LA|U|1065
3JA1|1|LA|U|1066
3JA1|1|LA|A|1067
3JA1|1|LA|G|1068
3JA1|1|LA|A|1069
3JA1|1|LA|A|1070
3JA1|1|LA|G|1071
3JA1|1|LA|C|1072
3JA1|1|LA|A|1073
3JA1|1|LA|G|1074

Current chains

Chain LA

23S ribosomal RNA

Nearby chains

Chain LK

50S ribosomal protein L11

Chain S3

Elongation factor G