HL_3JA1_030

3D structure

PDB id

3JA1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Activation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor G

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CUUAUG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_3JA1_030 not in the Motif Atlas

Geometric match to HL_4YAZ_004

Geometric discrepancy: 0.3164

The information below is about HL_4YAZ_004

Detailed Annotation

Mini UNCG

Broad Annotation

No text annotation

Motif group

HL_48778.2

Basepair signature

cWW-F

Number of instances in this motif group

46

Unit IDs

3JA1|1|LA|C|1172
3JA1|1|LA|U|1173
3JA1|1|LA|U|1174
3JA1|1|LA|A|1175
3JA1|1|LA|U|1176
3JA1|1|LA|G|1177

Current chains

Chain LA

23S ribosomal RNA

Nearby chains