HL_3JA1_058

3D structure

PDB id

3JA1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Activation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor G

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CGAAAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_3JA1_058 not in the Motif Atlas

Homologous match to HL_7A0S_057

Geometric discrepancy: 0.2384

The information below is about HL_7A0S_057

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.8

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

352

Unit IDs

3JA1|1|LA|C|2374
3JA1|1|LA|G|2375
3JA1|1|LA|A|2376
3JA1|1|LA|A|2377
3JA1|1|LA|A|2378
3JA1|1|LA|G|2379

Current chains

Chain LA

23S ribosomal RNA

Nearby chains

Chain L4

50S ribosomal protein L33

Chain LQ

50S ribosomal protein L18