HL_3JA1_065

3D structure

PDB id

3JA1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Activation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor G

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

AUGCCAAU

Length

8 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_3JA1_065 not in the Motif Atlas

Geometric match to HL_3R4F_002

Geometric discrepancy: 0.3401

The information below is about HL_3R4F_002

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_38592.1

Basepair signature

cWW-cWW-F-F

Number of instances in this motif group

2

Unit IDs

3JA1|1|LA|A|2700
3JA1|1|LA|U|2701
3JA1|1|LA|G|2702
3JA1|1|LA|C|2703
3JA1|1|LA|C|2704
3JA1|1|LA|A|2705
3JA1|1|LA|A|2706
3JA1|1|LA|U|2707

Current chains

Chain LA

23S ribosomal RNA

Nearby chains

Chain LP

50S ribosomal protein L17