HL_3JA1_067

3D structure

PDB id

3JA1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Activation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor G

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

UUUAA

Length

5 nucleotides

Bulged bases

3JA1|1|LA|A|2799

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_3JA1_067 not in the Motif Atlas

Geometric match to HL_4V88_192

Geometric discrepancy: 0.2168

The information below is about HL_4V88_192

Detailed Annotation

Mini UNCG

Broad Annotation

No text annotation

Motif group

HL_43793.1

Basepair signature

cWW-F

Number of instances in this motif group

50

Unit IDs

3JA1|1|LA|U|2796
3JA1|1|LA|U|2797
3JA1|1|LA|U|2798
3JA1|1|LA|A|2799
3JA1|1|LA|A|2800

Current chains

Chain LA

23S ribosomal RNA

Nearby chains