HL_3JA1_074
3D structure
- PDB id
- 3JA1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Activation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor G
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- GUUCAAAUC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_3JA1_074 not in the Motif Atlas
- Homologous match to HL_3AMU_003
- Geometric discrepancy: 0.4712
- The information below is about HL_3AMU_003
- Detailed Annotation
- T-loop with 2 stacked bulged bases
- Broad Annotation
- T-loop
- Motif group
- HL_28252.9
- Basepair signature
- cWW-tWH-F-F-F-F-F
- Number of instances in this motif group
- 141
Unit IDs
3JA1|1|S2|G|54
3JA1|1|S2|U|55
3JA1|1|S2|U|56
3JA1|1|S2|C|57
3JA1|1|S2|A|58
3JA1|1|S2|A|59
3JA1|1|S2|A|60
3JA1|1|S2|U|61
3JA1|1|S2|C|62
Current chains
- Chain S2
- P/E-tRNA
Nearby chains
- Chain LA
- Large subunit ribosomal RNA; LSU rRNA
- Chain LC
- 50S ribosomal protein L1
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