HL_3JA1_091
3D structure
- PDB id
- 3JA1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Activation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor G
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- GAUUAGAUACC
- Length
- 11 nucleotides
- Bulged bases
- 3JA1|1|SA|U|789, 3JA1|1|SA|A|790, 3JA1|1|SA|U|793
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_3JA1_091 not in the Motif Atlas
- Geometric match to HL_6GSK_204
- Geometric discrepancy: 0.3952
- The information below is about HL_6GSK_204
- Detailed Annotation
- T-loop
- Broad Annotation
- T-loop
- Motif group
- HL_20535.2
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 3
Unit IDs
3JA1|1|SA|G|786
3JA1|1|SA|A|787
3JA1|1|SA|U|788
3JA1|1|SA|U|789
3JA1|1|SA|A|790
3JA1|1|SA|G|791
3JA1|1|SA|A|792
3JA1|1|SA|U|793
3JA1|1|SA|A|794
3JA1|1|SA|C|795
3JA1|1|SA|C|796
Current chains
- Chain SA
- 16S ribosomal RNA
Nearby chains
- Chain LA
- Large subunit ribosomal RNA; LSU rRNA
- Chain S1
- mRNA
- Chain S2
- Transfer RNA; tRNA
- Chain SK
- 30S ribosomal protein S11
Coloring options: