HL_3JAI_082
3D structure
- PDB id
- 3JAI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a mammalian ribosomal termination complex with ABCE1, eRF1(AAQ), and the UGA stop codon
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.65 Å
Loop
- Sequence
- GUGAAUUGCAGGACACAUUGAUC
- Length
- 23 nucleotides
- Bulged bases
- 3JAI|1|8|A|82, 3JAI|1|8|A|84, 3JAI|1|8|U|86
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_3JAI_082 not in the Motif Atlas
- Homologous match to HL_8C3A_075
- Geometric discrepancy: 0.4811
- The information below is about HL_8C3A_075
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_07882.1
- Basepair signature
- cWW-F-F-tSH-tHS-F-F-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 2
Unit IDs
3JAI|1|8|G|68
3JAI|1|8|U|69
3JAI|1|8|G|70
3JAI|1|8|A|71
3JAI|1|8|A|72
3JAI|1|8|U|73
3JAI|1|8|U|74
3JAI|1|8|G|75
3JAI|1|8|C|76
3JAI|1|8|A|77
3JAI|1|8|G|78
3JAI|1|8|G|79
3JAI|1|8|A|80
3JAI|1|8|C|81
3JAI|1|8|A|82
3JAI|1|8|C|83
3JAI|1|8|A|84
3JAI|1|8|U|85
3JAI|1|8|U|86
3JAI|1|8|G|87
3JAI|1|8|A|88
3JAI|1|8|U|89
3JAI|1|8|C|90
Current chains
- Chain 8
- 5.8S ribosomal RNA
Nearby chains
- Chain 5
- Large subunit ribosomal RNA; LSU rRNA
- Chain Y
- uL24
- Chain h
- uL29
- Chain j
- eL37
- Chain l
- eL39
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