HL_3JAJ_054
3D structure
- PDB id
- 3JAJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the engaged state of the mammalian SRP-ribosome complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.75 Å
Loop
- Sequence
- CCGCGGCGG
- Length
- 9 nucleotides
- Bulged bases
- 3JAJ|1|5|C|3673
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_3JAJ_054 not in the Motif Atlas
- Geometric match to HL_2Y9H_005
- Geometric discrepancy: 0.3598
- The information below is about HL_2Y9H_005
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_51020.1
- Basepair signature
- cWW-cSW-F
- Number of instances in this motif group
- 11
Unit IDs
3JAJ|1|5|C|3667
3JAJ|1|5|C|3668
3JAJ|1|5|G|3669
3JAJ|1|5|C|3670
3JAJ|1|5|G|3671
3JAJ|1|5|G|3672
3JAJ|1|5|C|3673
3JAJ|1|5|G|3674
3JAJ|1|5|G|3675
Current chains
- Chain 5
- 28S ribosomal RNA
Nearby chains
- Chain A
- Ribosomal protein uL2
- Chain N
- Ribosomal protein eL15
Coloring options: