HL_3JAJ_092
3D structure
- PDB id
- 3JAJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the engaged state of the mammalian SRP-ribosome complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.75 Å
Loop
- Sequence
- CCUGAGAAACGG
- Length
- 12 nucleotides
- Bulged bases
- 3JAJ|1|S2|C|450, 3JAJ|1|S2|G|451
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_3JAJ_092 not in the Motif Atlas
- Homologous match to HL_4V88_195
- Geometric discrepancy: 0.3097
- The information below is about HL_4V88_195
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_06226.1
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 5
Unit IDs
3JAJ|1|S2|C|441
3JAJ|1|S2|C|442
3JAJ|1|S2|U|443
3JAJ|1|S2|G|444
3JAJ|1|S2|A|445
3JAJ|1|S2|G|446
3JAJ|1|S2|A|447
3JAJ|1|S2|A|448
3JAJ|1|S2|A|449
3JAJ|1|S2|C|450
3JAJ|1|S2|G|451
3JAJ|1|S2|G|452
Current chains
- Chain S2
- 18S ribosomal RNA
Nearby chains
- Chain SE
- Ribosomal protein eS4
- Chain SG
- Ribosomal protein eS6
- Chain SI
- Ribosomal protein eS8
- Chain SY
- Ribosomal protein eS24
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