HL_3JAJ_096
3D structure
- PDB id
- 3JAJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the engaged state of the mammalian SRP-ribosome complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.75 Å
Loop
- Sequence
- UCCACUUUAAAUCCUUCCG
- Length
- 19 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_3JAJ_096 not in the Motif Atlas
- Geometric match to HL_8C3A_054
- Geometric discrepancy: 0.2261
- The information below is about HL_8C3A_054
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_71121.1
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 24
Unit IDs
3JAJ|1|S2|U|566
3JAJ|1|S2|C|567
3JAJ|1|S2|C|568
3JAJ|1|S2|A|569
3JAJ|1|S2|C|570
3JAJ|1|S2|U|571
3JAJ|1|S2|U|572
3JAJ|1|S2|U|573
3JAJ|1|S2|A|574
3JAJ|1|S2|A|575
3JAJ|1|S2|A|576
3JAJ|1|S2|U|577
3JAJ|1|S2|C|578
3JAJ|1|S2|C|579
3JAJ|1|S2|U|580
3JAJ|1|S2|U|581
3JAJ|1|S2|C|582
3JAJ|1|S2|C|583
3JAJ|1|S2|G|584
Current chains
- Chain S2
- 18S ribosomal RNA
Nearby chains
- Chain SJ
- Ribosomal protein uS4
- Chain SY
- Ribosomal protein eS24
Coloring options: