HL_3JAM_020

3D structure

PDB id

3JAM (explore in PDB, NAKB, or RNA 3D Hub)

Description

CryoEM structure of 40S-eIF1A-eIF1 complex from yeast

Experimental method

ELECTRON MICROSCOPY

Resolution

3.46 Å

Loop

Sequence

AGGUGAAAUU

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_56205.1

Basepair signature

cWW-R-tSH-R-R-R-R

Number of instances in this motif group

26

Unit IDs

3JAM|1|2|A|899
3JAM|1|2|G|900
3JAM|1|2|G|901
3JAM|1|2|U|902
3JAM|1|2|G|903
3JAM|1|2|A|904
3JAM|1|2|A|905
3JAM|1|2|A|906
3JAM|1|2|U|907
3JAM|1|2|U|908

Current chains

Chain 2

18S rRNA

Nearby chains

Chain B

eS1

Chain O

uS11