HL_3JAM_022

3D structure

PDB id

3JAM (explore in PDB, NAKB, or RNA 3D Hub)

Description

CryoEM structure of 40S-eIF1A-eIF1 complex from yeast

Experimental method

ELECTRON MICROSCOPY

Resolution

3.46 Å

Loop

Sequence

GAUCAGAUACC

Length

11 nucleotides

Bulged bases

3JAM|1|2|U|1003

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_56205.1

Basepair signature

cWW-R-tSH-R-R-R-R

Number of instances in this motif group

26

Unit IDs

3JAM|1|2|G|996
3JAM|1|2|A|997
3JAM|1|2|U|998
3JAM|1|2|C|999
3JAM|1|2|A|1000
3JAM|1|2|G|1001
3JAM|1|2|A|1002
3JAM|1|2|U|1003
3JAM|1|2|A|1004
3JAM|1|2|C|1005
3JAM|1|2|C|1006

Current chains

Chain 2

18S rRNA

Nearby chains

Chain O

uS11

Chain a

eS26

Chain j

eIF1