HL_3JAM_026

3D structure

PDB id

3JAM (explore in PDB, NAKB, or RNA 3D Hub)

Description

CryoEM structure of 40S-eIF1A-eIF1 complex from yeast

Experimental method

ELECTRON MICROSCOPY

Resolution

3.46 Å

Loop

Sequence

GACUCAACAC

Length

10 nucleotides

Bulged bases

3JAM|1|2|A|1195

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_62686.1

Basepair signature

cWW-R-R-R-R-R-R

Number of instances in this motif group

10

Unit IDs

3JAM|1|2|G|1187
3JAM|1|2|A|1188
3JAM|1|2|C|1189
3JAM|1|2|U|1190
3JAM|1|2|C|1191
3JAM|1|2|A|1192
3JAM|1|2|A|1193
3JAM|1|2|C|1194
3JAM|1|2|A|1195
3JAM|1|2|C|1196

Current chains

Chain 2

18S rRNA

Nearby chains

Chain Q

uS9

Chain U

uS10

Chain d

uS14

Chain i

eIF1A