HL_3JAM_029

3D structure

PDB id

3JAM (explore in PDB, NAKB, or RNA 3D Hub)

Description

CryoEM structure of 40S-eIF1A-eIF1 complex from yeast

Experimental method

ELECTRON MICROSCOPY

Resolution

3.46 Å

Loop

Sequence

CUUAAUUG

Length

8 nucleotides

Bulged bases

3JAM|1|2|U|1313

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_06138.1

Basepair signature

cWW-cWW-R-R-R

Number of instances in this motif group

18

Unit IDs

3JAM|1|2|C|1308
3JAM|1|2|U|1309
3JAM|1|2|U|1310
3JAM|1|2|A|1311
3JAM|1|2|A|1312
3JAM|1|2|U|1313
3JAM|1|2|U|1314
3JAM|1|2|G|1315

Current chains

Chain 2

18S rRNA

Nearby chains

Chain R

eS17