3D structure

PDB id
3JAN (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the scanning state of the mammalian SRP-ribosome complex
Experimental method
ELECTRON MICROSCOPY
Resolution
3.75 Å

Loop

Sequence
GGGAGC
Length
6 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_30528.1
Basepair signature
cWW-tSH-R-R
Number of instances in this motif group
400

Unit IDs

3JAN|1|4|G|146
3JAN|1|4|G|147
3JAN|1|4|G|148
3JAN|1|4|A|149
3JAN|1|4|G|150
3JAN|1|4|C|151

Current chains

Chain 4
SRP 7S RNA

Nearby chains

Chain 9
SRP19

Coloring options:

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