HL_3JAN_034
3D structure
- PDB id
- 3JAN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the scanning state of the mammalian SRP-ribosome complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.75 Å
Loop
- Sequence
- CCAUGGAAGUCGG
- Length
- 13 nucleotides
- Bulged bases
- 3JAN|1|5|A|1984
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_3JAN_034 not in the Motif Atlas
- Geometric match to HL_1KH6_003
- Geometric discrepancy: 0.2454
- The information below is about HL_1KH6_003
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_27483.1
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 2
Unit IDs
3JAN|1|5|C|1977
3JAN|1|5|C|1978
3JAN|1|5|A|1979
3JAN|1|5|U|1980
3JAN|1|5|G|1981
3JAN|1|5|G|1982
3JAN|1|5|A|1983
3JAN|1|5|A|1984
3JAN|1|5|G|1985
3JAN|1|5|U|1986
3JAN|1|5|C|1987
3JAN|1|5|G|1988
3JAN|1|5|G|1989
Current chains
- Chain 5
- 28S ribosomal RNA
Nearby chains
- Chain I
- Ribosomal protein uL16
- Chain K
- Ribosomal protein uL11
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