HL_3JAN_057

3D structure

PDB id

3JAN (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the scanning state of the mammalian SRP-ribosome complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.75 Å

Loop

Sequence

AUCUAAUUAGU

Length

11 nucleotides

Bulged bases

3JAN|1|5|U|3802

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3JAN|1|5|A|3795
3JAN|1|5|U|3796
3JAN|1|5|C|3797
3JAN|1|5|U|3798
3JAN|1|5|A|3799
3JAN|1|5|A|3800
3JAN|1|5|U|3801
3JAN|1|5|U|3802
3JAN|1|5|A|3803
3JAN|1|5|G|3804
3JAN|1|5|U|3805

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain S2

Small subunit ribosomal RNA; SSU rRNA

Chain V

Ribosomal protein uL14