HL_3JAN_076

3D structure

PDB id

3JAN (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the scanning state of the mammalian SRP-ribosome complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.75 Å

Loop

Sequence

UUCGUAGACGACCUG

Length

15 nucleotides

Bulged bases

3JAN|1|5|U|4976

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3JAN|1|5|U|4972
3JAN|1|5|U|4973
3JAN|1|5|C|4974
3JAN|1|5|G|4975
3JAN|1|5|U|4976
3JAN|1|5|A|4977
3JAN|1|5|G|4978
3JAN|1|5|A|4979
3JAN|1|5|C|4980
3JAN|1|5|G|4981
3JAN|1|5|A|4982
3JAN|1|5|C|4983
3JAN|1|5|C|4984
3JAN|1|5|U|4985
3JAN|1|5|G|4986

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain B

Ribosomal protein uL3

Chain P

Ribosomal protein uL22

Chain d

Ribosomal protein eL31