HL_3JAN_090

3D structure

PDB id

3JAN (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the scanning state of the mammalian SRP-ribosome complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.75 Å

Loop

Sequence

AGUCGCCGUGCCU

Length

13 nucleotides

Bulged bases

3JAN|1|S2|G|385

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3JAN|1|S2|A|376
3JAN|1|S2|G|377
3JAN|1|S2|U|378
3JAN|1|S2|C|379
3JAN|1|S2|G|380
3JAN|1|S2|C|381
3JAN|1|S2|C|382
3JAN|1|S2|G|383
3JAN|1|S2|U|384
3JAN|1|S2|G|385
3JAN|1|S2|C|386
3JAN|1|S2|C|387
3JAN|1|S2|U|388

Current chains

Chain S2

18S ribosomal RNA

Nearby chains

Chain SI

Ribosomal protein eS8

Chain SL

Ribosomal protein uS17