HL_3JAN_093
3D structure
- PDB id
- 3JAN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the scanning state of the mammalian SRP-ribosome complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.75 Å
Loop
- Sequence
- CCAAGG
- Length
- 6 nucleotides
- Bulged bases
- 3JAN|1|S2|A|464
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_3JAN_093 not in the Motif Atlas
- Homologous match to HL_4V88_196
- Geometric discrepancy: 0.2035
- The information below is about HL_4V88_196
- Detailed Annotation
- UNCG
- Broad Annotation
- No text annotation
- Motif group
- HL_34617.1
- Basepair signature
- cWW-tSW-F
- Number of instances in this motif group
- 57
Unit IDs
3JAN|1|S2|C|462
3JAN|1|S2|C|463
3JAN|1|S2|A|464
3JAN|1|S2|A|465
3JAN|1|S2|G|466
3JAN|1|S2|G|467
Current chains
- Chain S2
- 18S ribosomal RNA
Nearby chains
- Chain S1
- SRP9
- Chain S4
- SRP14
- Chain SG
- Ribosomal protein eS6
- Chain V
- Ribosomal protein uL14
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