HL_3JAN_108
3D structure
- PDB id
- 3JAN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the scanning state of the mammalian SRP-ribosome complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.75 Å
Loop
- Sequence
- ACAGAUUGAUAGCUCUU
- Length
- 17 nucleotides
- Bulged bases
- 3JAN|1|S2|C|1292, 3JAN|1|S2|U|1300
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
3JAN|1|S2|A|1291
3JAN|1|S2|C|1292
3JAN|1|S2|A|1293
3JAN|1|S2|G|1294
3JAN|1|S2|A|1295
3JAN|1|S2|U|1296
3JAN|1|S2|U|1297
3JAN|1|S2|G|1298
3JAN|1|S2|A|1299
3JAN|1|S2|U|1300
3JAN|1|S2|A|1301
3JAN|1|S2|G|1302
3JAN|1|S2|C|1303
3JAN|1|S2|U|1304
3JAN|1|S2|C|1305
3JAN|1|S2|U|1306
3JAN|1|S2|U|1307
Current chains
- Chain S2
- 18S ribosomal RNA
Nearby chains
- Chain SP
- Ribosomal protein uS19
- Chain Sd
- Ribosomal protein uS14
- Chain Sf
- Ribosomal protein eS31
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