HL_3JBO_021

3D structure

PDB id

3JBO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-electron microscopy reconstruction of the Plasmodium falciparum 80S ribosome bound to P/E-tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

5.8 Å

Loop

Sequence

UUUUUGUUCUUA

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3JBO|1|A|U|892
3JBO|1|A|U|893
3JBO|1|A|U|894
3JBO|1|A|U|895
3JBO|1|A|U|896
3JBO|1|A|G|897
3JBO|1|A|U|905
3JBO|1|A|U|906
3JBO|1|A|C|907
3JBO|1|A|U|908
3JBO|1|A|U|909
3JBO|1|A|A|910

Current chains

Chain A

18S ribosomal RNA

Nearby chains

Chain L

40S ribosomal protein eS8