HL_3JBO_112
3D structure
- PDB id
- 3JBO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-electron microscopy reconstruction of the Plasmodium falciparum 80S ribosome bound to P/E-tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 5.8 Å
Loop
- Sequence
- UUUAUAGGGAUGAAUUUCCCAAUA
- Length
- 24 nucleotides
- Bulged bases
- 3JBO|1|AA|A|2834, 3JBO|1|AA|U|2883, 3JBO|1|AA|U|2915, 3JBO|1|AA|A|2920, 3JBO|1|AA|U|2925
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
3JBO|1|AA|U|2829
3JBO|1|AA|U|2830
3JBO|1|AA|U|2831
3JBO|1|AA|A|2832
3JBO|1|AA|U|2833
3JBO|1|AA|A|2834
3JBO|1|AA|G|2835
3JBO|1|AA|G|2836
3JBO|1|AA|G|2837
3JBO|1|AA|A|2838
3JBO|1|AA|U|2883
3JBO|1|AA|G|2884
3JBO|1|AA|A|2885
3JBO|1|AA|A|2886
3JBO|1|AA|U|2887
3JBO|1|AA|U|2888
3JBO|1|AA|U|2915
3JBO|1|AA|C|2916
3JBO|1|AA|C|2917
3JBO|1|AA|C|2918
3JBO|1|AA|A|2919
3JBO|1|AA|A|2920
3JBO|1|AA|U|2925
3JBO|1|AA|A|2926
Current chains
- Chain AA
- 28S ribosomal RNA
Nearby chains
- Chain A1
- 60S ribosomal protein eL27
- Chain A6
- 60S ribosomal protein eL30
- Chain AD
- 60S ribosomal protein uL2
- Chain AJ
- 60S ribosomal protein eL8
- Chain Aa
- 60S ribosomal protein eL34
- Chain Ah
- 60S ribosomal protein eL43
Coloring options: